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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PPP2R2D
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

PPP2R2D

Gene description

Protein phosphatase 2, regulatory subunit B, delta

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most cell types.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 2 antibodies.
HPA042122 , HPA042770
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PROGNOSTIC SUMMARY

Prognostic marker in colorectal cancer (unfavourable).
Colorectal cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA042122
HPA042770

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer cells showed weak to moderate cytoplasmic staining that in cases was combined with membranous and/or nuclear staining. Few cases of melanomas and prostate cancers were strongly stained. Carcinoids were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Hepatocellular carcinomas showed strong cytoplasmic staining. Cases of endometrial cancers and lung adenocarcinomas showed moderate cytoplasmic positivity. Remaining cancers were mainly negative.

GENE INFORMATION

Gene name

PPP2R2D (HGNC Symbol)

Synonyms

MDS026

Description

Protein phosphatase 2, regulatory subunit B, delta (HGNC Symbol)

Entrez gene summary

Chromosome

10

Cytoband

q26.3

Chromosome location (bp)

131900644 - 131959834

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000175470 (version 83.38)

Entrez gene

55844

UniProt

Q66LE6 (UniProt - Evidence at transcript level)

neXtProt

NX_Q66LE6

Antibodypedia

PPP2R2D antibodies

PROTEIN BROWSER

PPP2R2D-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PPP2R2D-001
ENSP00000399970
ENST00000455566
Q66LE6 [Direct mapping]
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000159 [protein phosphatase type 2A complex]
GO:0000278 [mitotic cell cycle]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0007067 [mitotic nuclear division]
GO:0008601 [protein phosphatase type 2A regulator activity]
GO:0010458 [exit from mitosis]
GO:0034047 [regulation of protein phosphatase type 2A activity]
GO:0051301 [cell division]
Show all
453 aa
52 kDa
No 0

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