Expression of SLC35A4 in cancer - Summary - The Human Protein Atlas

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SLC35A4

TISSUE

CELL

PATHOLOGY

GENERAL INFORMATION
Gene name	SLC35A4
Gene description	Solute carrier family 35, member A4
Protein class	Predicted membrane proteins Transporters
Predicted localization	Membrane
Number of transcripts	4
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Mixed
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY
Reliability score	Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION
Pending cancer tissue analysis
STAINING SUMMARY

GENE INFORMATION
Gene name	SLC35A4
Synonyms
Description	Solute carrier family 35, member A4 (HGNC Symbol)
Entrez gene summary
Chromosome	5
Cytoband	q31.3
Chromosome location (bp)	140564456 - 140569103
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000176087 (version 83.38)
Entrez gene	113829
UniProt	Q96G79 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96G79
Antibodypedia	SLC35A4 antibodies

PROTEIN BROWSER

SLC35A4-001	SLC35A4-004	SLC35A4-006	SLC35A4-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SLC35A4-001 ENSP00000327133 ENST00000323146	Q96G79 [Direct mapping] Probable UDP-sugar transporter protein SLC35A4 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 8TM proteins predicted by MDM Show all	GO:0000139 [Golgi membrane] GO:0005351 [sugar:proton symporter activity] GO:0008643 [carbohydrate transport] GO:0015992 [proton transport] GO:0016021 [integral component of membrane] Show all	324 aa 34.6 kDa	No	8
SLC35A4-004 ENSP00000424566 ENST00000514199	Q96G79 [Direct mapping] Probable UDP-sugar transporter protein SLC35A4 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 8TM proteins predicted by MDM Show all	GO:0000139 [Golgi membrane] GO:0005351 [sugar:proton symporter activity] GO:0008643 [carbohydrate transport] GO:0015992 [proton transport] GO:0016021 [integral component of membrane] Show all	324 aa 34.6 kDa	No	8
SLC35A4-006 ENSP00000485218 ENST00000623481	L0R6Q1 [Direct mapping] Alternative protein SLC35A4; Probable UDP-sugar transporter protein SLC35A4 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all		103 aa 11.1 kDa	No	1
SLC35A4-201 ENSP00000479255 ENST00000612662	Q96G79 [Direct mapping] Probable UDP-sugar transporter protein SLC35A4 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 8TM proteins predicted by MDM Show all	GO:0000139 [Golgi membrane] GO:0005351 [sugar:proton symporter activity] GO:0008643 [carbohydrate transport] GO:0015992 [proton transport] GO:0016021 [integral component of membrane] Show all	324 aa 34.6 kDa	No	8

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.