Expression of DNAJC30 in cancer - Summary - The Human Protein Atlas

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DNAJC30

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	DNAJC30
Gene description	DnaJ (Hsp40) homolog, subfamily C, member 30
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA017318
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (favourable) and glioma (unfavourable).
Renal cancer p<0.001 Glioma p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA017318

GENE INFORMATION
Gene name	DNAJC30 (HGNC Symbol)
Synonyms	WBSCR18
Description	DnaJ (Hsp40) homolog, subfamily C, member 30 (HGNC Symbol)
Entrez gene summary	This intronless gene encodes a member of the DNAJ molecular chaperone homology domain-containing protein family. This gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. [provided by RefSeq, Jul 2008]
Chromosome	7
Cytoband	q11.23
Chromosome location (bp)	73680969 - 73683453
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000176410 (version 83.38)
Entrez gene	84277
UniProt	Q96LL9 (UniProt - Evidence at protein level)
neXtProt	NX_Q96LL9
Antibodypedia	DNAJC30 antibodies

PROTEIN BROWSER

DNAJC30-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
DNAJC30-001 ENSP00000378605 ENST00000395176	Q96LL9 [Direct mapping] DnaJ homolog subfamily C member 30 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] Show all	226 aa 26 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.