Cell atlas - FAM9B - The Human Protein Atlas

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FAM9B

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION HUMAN CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Nucleoplasm

Human cell
	Nucleoplasm

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GENERAL INFORMATION
Gene name	FAM9B
Gene description	Family with sequence similarity 9, member B
Protein class	Plasma proteins Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the nucleoplasm.
RNA cell category	Group enriched (U-266/84, U-266/70)
Protein evidence	Evidence at protein level
Main location	Localized to the Nucleoplasm (uncertain)

DATA RELIABILITY
Reliability score	Uncertain based on 1 antibody. HPA035135
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ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Group enriched (U-266/84, U-266/70) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the nucleoplasm.

Main location

Nucleoplasm (uncertain)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA035135	A-431	Nucleoplasm
	HPA035135	U-2 OS	Nucleoplasm
	HPA035135	U-251 MG	Nucleoplasm

GENE INFORMATION
Gene name	FAM9B (HGNC Symbol)
Synonyms	TEX39B
Description	Family with sequence similarity 9, member B (HGNC Symbol)
Entrez gene summary	This gene is a member of a gene family which arose through duplication on the X chromosome. The encoded protein may be localized to the nucleus as the protein contains several nuclear localization signals, and has similarity to a synaptonemal complex protein. [provided by RefSeq, Aug 2011]
Chromosome	X
Cytoband	p22.31
Chromosome location (bp)	9024232 - 9164639
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000177138 (version 83.38)
Entrez gene	171483
UniProt	Q8IZU0 (UniProt - Evidence at protein level)
neXtProt	NX_Q8IZU0
Antibodypedia	FAM9B antibodies

PROTEIN BROWSER

FAM9B-002	FAM9B-003	FAM9B-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM9B-002 ENSP00000318716 ENST00000327220	Q8IZU0 [Direct mapping] Protein FAM9B A0A024RBV3 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member B, isoform CRA_c Show all	Predicted intracellular proteins Plasma proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0007286 [spermatid development] Show all	186 aa 22.4 kDa	No	0
FAM9B-003 ENSP00000354770 ENST00000362066	Q8IZU0 [Direct mapping] Protein FAM9B Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Plasma proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0007286 [spermatid development] Show all	226 aa 26.1 kDa	Yes	0
FAM9B-201 ENSP00000412606 ENST00000428477	Q8IZU0 [Direct mapping] Protein FAM9B A0A024RBV3 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member B, isoform CRA_c Show all	Predicted intracellular proteins Plasma proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0007286 [spermatid development] Show all	186 aa 22.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.