We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PNPLA2
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS BREAST

GENE/PROTEIN

Dictionary

Breast

BREAST - Expression summary

RNA expression

HPA:20.2TPM
GTEx:395.5RPKM
FANTOM5:239.9Tags Per Million

BREAST - Annotated protein expression

Pending normal tissue analysis


BREAST - HPA RNA-seq

Average TPM

20.2

overview Female, age 52 Sample 1
TPM: 23.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 36.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 16.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 4.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

395.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 395.5
Samples: 214

Max RPKM: 1416.1
Min RPKM: 31.7
Std RPKM: 316.7
Median RPKM: 263.6
GTEX-11P82-1326-SM-5HL62 20-29 years, male 1416.1
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 1378.9
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 1186.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 1178.1
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 1130.1
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 1122.5
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 1033.2
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 1029.1
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 1022.5
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 1014.8
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 1014.0
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 1005.5
GTEX-144GM-0926-SM-5O994 20-29 years, male 968.5
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 954.3
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 924.8
GTEX-R55D-0826-SM-48FEA 50-59 years, male 918.3
GTEX-REY6-2426-SM-48FF5 60-69 years, male 905.3
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 903.5
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 900.8
GTEX-R53T-1526-SM-48FEK 50-59 years, female 900.6
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 890.9
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 872.0
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 871.1
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 856.8
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 851.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 841.6
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 837.4
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 836.5
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 831.9
GTEX-117YX-1426-SM-5H12H 50-59 years, male 830.8
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 823.6
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 813.1
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 806.1
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 799.4
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 790.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 788.3
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 785.1
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 777.8
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 753.2
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 744.7
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 737.8
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 727.6
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 703.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 697.2
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 691.9
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 673.3
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 669.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 668.9
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 651.7
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 648.6
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 641.6
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 637.6
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 634.5
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 627.4
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 620.4
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 610.1
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 607.1
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 598.2
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 596.0
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 578.3
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 567.1
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 562.2
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 561.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 557.4
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 544.8
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 535.3
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 508.5
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 506.7
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 494.7
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 492.3
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 483.5
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 481.7
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 477.1
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 447.1
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 445.4
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 444.8
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 434.3
GTEX-WFON-1826-SM-3GILG 40-49 years, male 431.8
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 429.9
GTEX-117XS-1926-SM-5GICO 60-69 years, male 429.4
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 426.0
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 424.0
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 423.0
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 422.9
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 420.5
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 397.2
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 379.1
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 373.7
GTEX-13113-1726-SM-5GCOO 60-69 years, female 366.3
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 363.4
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 361.1
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 355.4
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 350.2
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 340.6
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 331.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 326.0
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 322.9
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 316.6
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 315.8
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 314.9
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 307.3
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 300.9
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 293.6
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 287.6
GTEX-QEL4-2126-SM-447AE 50-59 years, male 285.5
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 285.4
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 264.8
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 262.5
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 261.0
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 260.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 257.0
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 256.8
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 256.1
GTEX-1122O-1226-SM-5H113 60-69 years, female 252.0
GTEX-11P81-1926-SM-5BC53 30-39 years, female 241.9
GTEX-14753-2426-SM-5LU8U 60-69 years, male 240.2
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 240.2
GTEX-1192X-2326-SM-5987X 50-59 years, male 235.7
GTEX-QVJO-1826-SM-447C9 60-69 years, female 233.3
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 223.0
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 222.3
GTEX-X261-0626-SM-3NMD9 50-59 years, male 217.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 216.2
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 205.1
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 202.1
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 201.3
GTEX-TML8-1226-SM-32QON 40-49 years, female 198.8
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 197.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 197.0
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 196.9
GTEX-11OF3-1926-SM-59889 60-69 years, male 191.7
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 184.4
GTEX-XBED-1626-SM-47JYN 60-69 years, male 183.4
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 182.4
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 181.9
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 178.1
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 172.8
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 172.1
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 166.0
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 165.6
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 165.3
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 162.6
GTEX-111YS-1926-SM-5GICC 60-69 years, male 159.9
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 159.7
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 157.8
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 146.3
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 143.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 143.5
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 142.9
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 142.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 140.4
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 139.4
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 139.1
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 137.7
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 137.5
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 134.0
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 131.7
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 130.2
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 128.4
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 126.3
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 125.4
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 124.8
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 121.3
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 120.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 118.2
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 117.0
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 116.9
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 116.9
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 116.7
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 116.4
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 116.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 116.1
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 114.8
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 113.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 113.0
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 112.7
GTEX-S341-1526-SM-4AD6K 40-49 years, female 111.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 106.7
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 104.8
GTEX-11EI6-0626-SM-5985T 60-69 years, male 103.6
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 103.1
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 98.5
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 98.4
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 98.2
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 98.2
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 96.9
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 95.9
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 95.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 95.6
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 95.2
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 94.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 91.4
GTEX-T6MN-0726-SM-32PML 50-59 years, male 90.7
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 89.7
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 89.0
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 88.2
GTEX-RU72-0626-SM-46MUI 50-59 years, female 87.9
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 85.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 85.4
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 84.7
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 84.1
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 83.6
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 83.2
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 83.2
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 81.6
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 81.1
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 80.3
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 76.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 72.2
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 71.9
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 70.8
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 68.1
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 57.5
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 31.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

239.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 239.9
FF:10080-102A8 77 years, female 239.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.