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PNPLA2

COLON - Expression summary

RNA expression
HPA:18.0TPM
GTEx:59.8RPKM
FANTOM5:83.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

18.0
overview Male, age 54 Sample 1
TPM: 42.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 48.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

59.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 48.4
Samples: 149

Max RPKM: 106.6
Min RPKM: 22.1
Std RPKM: 14.2
Median RPKM: 46.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 106.6
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 85.4
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 81.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 80.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 80.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 78.6
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 77.9
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 75.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 74.4
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 72.5
Show all
Colon - Transverse
RPKM: 68.6
Samples: 196

Max RPKM: 628.4
Min RPKM: 22.9
Std RPKM: 47.7
Median RPKM: 60.1
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 628.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 242.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 182.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 134.8
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 128.8
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 122.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 122.3
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 121.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 121.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 108.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

83.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 83.0
FF:10014-101C5 62,83,84 years, mixed 83.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.