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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Detectable

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Detectable

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OTOS
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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

OTOS

Gene description

Otospiralin

Protein class

Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Group enriched (glioma, thyroid cancer)
HPA (cell line):Not detected
HPA (normal tissue):Tissue enriched (thyroid gland)

Protein evidence

Evidence at transcript level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Group enriched (glioma, thyroid cancer)

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

OTOS (HGNC Symbol)

Synonyms

OTOSP

Description

Otospiralin (HGNC Symbol)

Entrez gene summary

Otospiralin is synthesized by nonsensory cells (fibrocytes) of the inner ear, and downregulation of otospiralin in guinea pigs leads to deafness (Lavigne-Rebillard et al., 2003 [PubMed 12687421]).[supplied by OMIM, Mar 2008]

Chromosome

2

Cytoband

q37.3

Chromosome location (bp)

240139026 - 240144562

Protein evidence

Evidence at transcript level (all genes)

Ensembl

ENSG00000178602 (version 83.38)

Entrez gene

150677

UniProt

Q8NHW6 (UniProt - Evidence at transcript level)

neXtProt

NX_Q8NHW6

Antibodypedia

OTOS antibodies

PROTEIN BROWSER

OTOS-001
OTOS-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

OTOS-001
ENSP00000375849
ENST00000391989
Q8NHW6 [Direct mapping]
Otospiralin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0007605 [sensory perception of sound]
Show all
89 aa
9.9 kDa
Yes 0
OTOS-201
ENSP00000322486
ENST00000319460
Q8NHW6 [Direct mapping]
Otospiralin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0005576 [extracellular region]
GO:0007605 [sensory perception of sound]
Show all
89 aa
9.9 kDa
Yes 0

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