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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RPP25
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RPP25

Gene description

Ribonuclease P/MRP 25kDa subunit

Protein class

Enzymes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (SCLC-21H, SK-MEL-30)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General nuclear expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA046900
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PROGNOSTIC SUMMARY

Prognostic marker in glioma (unfavourable).
Glioma p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA046900

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most malignant cells displayed weak to moderate nuclear positivity. Few cases of malignant melanomas, colorectal, testicular, cervical and gastric cancers were strongly stained. Several cases of malignant gliomas, malignant lymphomas, liver and renal cancers were negative.

GENE INFORMATION

Gene name

RPP25 (HGNC Symbol)

Synonyms

FLJ20374

Description

Ribonuclease P/MRP 25kDa subunit (HGNC Symbol)

Entrez gene summary

Chromosome

15

Cytoband

q24.2

Chromosome location (bp)

74954416 - 74957464

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000178718 (version 83.38)

Entrez gene

54913

UniProt

Q9BUL9 (UniProt - Evidence at protein level)

neXtProt

NX_Q9BUL9

Antibodypedia

RPP25 antibodies

PROTEIN BROWSER

RPP25-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RPP25-001
ENSP00000317691
ENST00000322177
Q9BUL9 [Direct mapping]
Ribonuclease P protein subunit p25
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Enzymes
   ENZYME proteins
   Hydrolases
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0004526 [ribonuclease P activity]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005815 [microtubule organizing center]
GO:0008033 [tRNA processing]
GO:0010467 [gene expression]
GO:0044822 [poly(A) RNA binding]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
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199 aa
20.6 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.