Expression of ZNF648 in cancer - Summary - The Human Protein Atlas

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ZNF648

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ZNF648
Gene description	Zinc finger protein 648
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Cell line enriched (HMC-1)
HPA (normal tissue):	Not detected

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. No RNA expression data detected and pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA053897
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA053897

GENE INFORMATION
Gene name	ZNF648 (HGNC Symbol)
Synonyms	FLJ46813
Description	Zinc finger protein 648 (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	q25.3
Chromosome location (bp)	182054570 - 182061712
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000179930 (version 83.38)
Entrez gene	127665
UniProt	Q5T619 (UniProt - Evidence at transcript level)
neXtProt	NX_Q5T619
Antibodypedia	ZNF648 antibodies

PROTEIN BROWSER

ZNF648-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZNF648-001 ENSP00000344129 ENST00000339948	Q5T619 [Direct mapping] Zinc finger protein 648 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Show all	GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0046872 [metal ion binding] Show all	568 aa 62.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.