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Term
Gene name

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Chromosome

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In atlas

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Method

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Detectable

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PSMG4
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

PSMG4

Gene description

Proteasome (prosome, macropain) assembly chaperone 4

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
0.00.10.20.30.40.50.60.70.80.91.0 0 1 2 3 4 5 6 7 8 910111213141516 Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all
0.01.02.03.04.05.06.07.08.09.010FPKMBreast cancer (BRCA)Cervical cancer (CESC)Colorectal cancer (COAD,READ)Endometrial cancer (UCEC)Glioma (GBM)Head and neck cancer (HNSC)Liver cancer (LIHC)Lung cancer (LUAD,LUSC)Melanoma (SKCM)Ovarian cancer (OV)Pancreatic cancer (PAAD)Prostate cancer (PRAD)Renal cancer (KICH,KIRC,KIRP)Stomach cancer (STAD)Testis cancer (TGCT)Thyroid cancer (THCA)Urothelial cancer (BLCA)

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

PSMG4 (HGNC Symbol)

Synonyms

C6orf86, PAC4

Description

Proteasome (prosome, macropain) assembly chaperone 4 (HGNC Symbol)

Entrez gene summary

Chromosome

6

Cytoband

p25.2

Chromosome location (bp)

3231403 - 3303373

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000180822 (version 83.38)

Entrez gene

389362

UniProt

Q5JS54 (UniProt - Evidence at transcript level)

neXtProt

NX_Q5JS54

Antibodypedia

PSMG4 antibodies

PROTEIN BROWSER

PSMG4-001
PSMG4-002
PSMG4-003
PSMG4-004
PSMG4-006
PSMG4-007
PSMG4-008

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PSMG4-001
ENSP00000369661
ENST00000380306
F2Z3E0 [Direct mapping]
Proteasome assembly chaperone 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
124 aa
14.4 kDa
No 0
PSMG4-002
ENSP00000369660
ENST00000380305
E2QRC7 [Direct mapping]
Proteasome assembly chaperone 4
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
82 aa
9.2 kDa
No 0
PSMG4-003
ENSP00000418241
ENST00000473000
Q5JS54 [Direct mapping]
Proteasome assembly chaperone 4
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
104 aa
11.2 kDa
No 0
PSMG4-004
ENSP00000413353
ENST00000438998
Q5JS54 [Direct mapping]
Proteasome assembly chaperone 4
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
123 aa
13.8 kDa
No 0
PSMG4-006
ENSP00000392353
ENST00000419065
Q5JS54 [Direct mapping]
Proteasome assembly chaperone 4
Show all
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
162 aa
17.7 kDa
No 0
PSMG4-007
ENSP00000415768
ENST00000454610
H7C465 [Direct mapping]
Proteasome assembly chaperone 4
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
117 aa
13 kDa
No 0
PSMG4-008
ENSP00000407702
ENST00000451246
D6REN3 [Direct mapping]
Proteasome assembly chaperone 4
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
76 aa
8.3 kDa
No 0

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