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LSM10

GENERAL INFORMATION

Gene name

 LSM10

Gene description

 LSM10, U7 small nuclear RNA associated

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

 Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (unfavourable), liver cancer (unfavourable) and pancreatic cancer (favourable).
Renal cancer p<0.001
Liver cancer p<0.001
Pancreatic cancer p<0.001
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 LSM10 (HGNC Symbol)

Synonyms

 MGC15749

Description

 LSM10, U7 small nuclear RNA associated (HGNC Symbol)

Entrez gene summary

Chromosome

 1

Cytoband

 p34.3

Chromosome location (bp)

 36391238 - 36397892

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000181817 (version 83.38)

Entrez gene

 84967

UniProt

 Q969L4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q969L4

Antibodypedia

 LSM10 antibodies

PROTEIN BROWSER
LSM10-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
LSM10-001
ENSP00000319341
ENST00000315732
Q969L4 [Direct mapping]
U7 snRNA-associated Sm-like protein LSm10
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Predicted intracellular proteins
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GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005683 [U7 snRNP]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0006369 [termination of RNA polymerase II transcription]
GO:0008334 [histone mRNA metabolic process]
GO:0008380 [RNA splicing]
GO:0010467 [gene expression]
GO:0015030 [Cajal body]
GO:0031124 [mRNA 3'-end processing]
GO:0071208 [histone pre-mRNA DCP binding]
GO:1900087 [positive regulation of G1/S transition of mitotic cell cycle]
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 123 aa
14.1 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.