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RNF41

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.8TPM
GTEx:11.6RPKM
FANTOM5:18.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA016812

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

17.8
overview Male, age 54 Sample 1
TPM: 16.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 16
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.3
Samples: 149

Max RPKM: 24.6
Min RPKM: 7.3
Std RPKM: 3.2
Median RPKM: 12.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 24.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 24.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 23.1
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 21.9
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 21.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 21.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 19.7
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 19.6
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 19.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 18.8
Show all
Colon - Transverse
RPKM: 10.2
Samples: 196

Max RPKM: 22.9
Min RPKM: 4.1
Std RPKM: 3.4
Median RPKM: 9.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 22.9
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 20.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 20.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 18.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 18.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 17.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 17.6
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 17.5
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 17.2
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 16.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.5
FF:10014-101C5 62,83,84 years, mixed 18.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.