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VMO1

SOFT TISSUE - Expression summary

RNA expression
HPA:3.8TPM
GTEx:2.9RPKM
FANTOM5:1.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression
 

Antibody staining

Antibody HPA023038

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression
 

Antibody staining

Antibody HPA023038

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

3.8
N/A Female, age 80 Sample 1
TPM: 2.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 0.6
N/A Female, age 57 Sample 3
TPM: 0.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 3.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 11.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 2.7
Samples: 350

Max RPKM: 152.2
Min RPKM: 0.1
Std RPKM: 8.9
Median RPKM: 1.5
GTEX-13NYS-0226-SM-5MR49 60-69 years, male 152.2
GTEX-13YAN-0426-SM-5O9DR 60-69 years, male 56.5
GTEX-111VG-2326-SM-5N9BK 60-69 years, male 27.5
GTEX-13JVG-0226-SM-5J1MW 60-69 years, male 22.1
GTEX-13FHO-0326-SM-5IJBH 60-69 years, male 16.3
GTEX-11UD2-0126-SM-5EQL2 50-59 years, male 14.1
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 12.9
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 11.0
GTEX-YJ8A-0526-SM-5IFHT 20-29 years, male 11.0
GTEX-11UD1-0226-SM-5EQKL 40-49 years, female 9.6
Show all
Adipose - Visceral (Omentum)
RPKM: 3.2
Samples: 227

Max RPKM: 48.9
Min RPKM: 0.2
Std RPKM: 4.8
Median RPKM: 1.9
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 48.9
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 38.1
GTEX-ZTPG-2326-SM-57WFL 20-29 years, female 20.1
GTEX-ZYW4-2226-SM-5GZYG 60-69 years, male 20.1
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 17.5
GTEX-145MI-0826-SM-5SI95 60-69 years, female 16.2
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 13.0
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 11.0
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 10.3
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 9.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1.7
FF:10010-101C1 65,65,76 years, mixed 1.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.