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C11orf54

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:40.1TPM
GTEx:5.9RPKM
FANTOM5:46.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA040088

  

Antibody HPA040511

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

40.1
overview Male, age 54 Sample 1
TPM: 43.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 57.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 49.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 33.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 29.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 41.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 40.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 36.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 50.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 43.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 37.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 36.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 8.1
Min RPKM: 2.4
Std RPKM: 0.8
Median RPKM: 4.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 8.1
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 6.6
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 6.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 6.2
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 6.0
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 6.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 5.7
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 5.6
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 5.6
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 5.6
Show all
Colon - Transverse
RPKM: 7.3
Samples: 196

Max RPKM: 15.0
Min RPKM: 1.4
Std RPKM: 2.9
Median RPKM: 6.9
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 15.0
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 14.5
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 14.2
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 13.7
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 13.3
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 13.0
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 13.0
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 13.0
GTEX-R55G-1226-SM-48FDC 40-49 years, female 12.9
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 12.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

46.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 46.8
FF:10014-101C5 62,83,84 years, mixed 46.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.