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COLON - Expression summary

RNA expression
HPA:0.0TPM
GTEx:0.1RPKM
FANTOM5:42.8Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA023498

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.0
overview Male, age 54 Sample 1
TPM: 0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 7.5
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 7.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 0.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 0.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 0.0
GTEX-1122O-1426-SM-5H11R 60-69 years, female 0.0
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 0.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 0.0
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 0.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 0.0
Show all
Colon - Transverse
RPKM: 0.2
Samples: 196

Max RPKM: 2.2
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 2.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 1.5
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 1.5
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 1.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 1.3
GTEX-R55G-1226-SM-48FDC 40-49 years, female 1.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 1.0
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 1.0
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 1.0
GTEX-144GM-1226-SM-5LU52 20-29 years, male 0.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

42.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 42.8
FF:10014-101C5 62,83,84 years, mixed 42.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.