Tissue expression of HMGN4 - Staining in breast

BREAST - Expression summary

RNA expression

HPA:	80.3	TPM
GTEx:	30.5	RPKM
FANTOM5:	48.6	Tags Per Million

BREAST - Annotated protein expression
Pending normal tissue analysis

BREAST - HPA RNA-seq

Average TPM	80.3

Female, age 52

Sample 1
TPM: 78.6

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 77.6

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 75.5

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 89.3

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	30.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 30.5

Samples: 214

Max RPKM: 47.8
Min RPKM: 16.2
Std RPKM: 6.1
Median RPKM: 30.4

GTEX-14AS3-1626-SM-5S2OY

40-49 years, female

47.8

GTEX-VJWN-0726-SM-3GIJ8

50-59 years, female

46.9

GTEX-ZVT2-1826-SM-5NQ8W

50-59 years, female

46.1

GTEX-W5X1-2326-SM-3GIL6

40-49 years, female

45.2

GTEX-11P7K-0726-SM-5EGKX

30-39 years, male

44.1

GTEX-12ZZX-1126-SM-5EGKB

40-49 years, female

43.6

GTEX-TML8-1226-SM-32QON

40-49 years, female

43.4

GTEX-14ABY-2126-SM-5QGQZ

50-59 years, male

42.9

GTEX-1314G-1226-SM-5BC6D

30-39 years, male

42.3

GTEX-XOT4-0726-SM-4GIAW

60-69 years, female

42.1

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	48.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 48.6

FF:10080-102A8

77 years, female

48.6