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OTOP2

COLON - Expression summary

RNA expression
HPA:20.3TPM
GTEx:6.8RPKM

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA024524

  

Antibody HPA053090

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

20.3
overview Male, age 54 Sample 1
TPM: 1.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 57.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 55.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 31.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 4.8
Min RPKM: 0.0
Std RPKM: 0.5
Median RPKM: 0.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 4.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 2.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 2.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 2.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.8
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 1.6
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 1.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 1.1
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 1.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.7
Show all
Colon - Transverse
RPKM: 11.8
Samples: 196

Max RPKM: 64.4
Min RPKM: 0.0
Std RPKM: 13.3
Median RPKM: 8.2
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 64.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 62.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 61.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 61.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 58.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 49.1
GTEX-QLQW-0426-SM-447A7 30-39 years, male 41.6
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 40.9
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 38.4
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 37.6
Show all

COLON - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.