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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PCP4
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    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

PCP4

Gene description

Purkinje cell protein 4

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (RPMI-8226, SK-BR-3, T-47d)
HPA (normal tissue):Tissue enhanced (prostate, seminal vesicle)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic and nuclear expression in most neuronal cells in CNS and in smooth muscle cells in male reproductive organs.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining in cells/structures not annotated, view images.

Reliability score

Supported based on 1 antibody.
HPA005792
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable) and cervical cancer (favourable).
Renal cancer p<0.001
Cervical cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA005792

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Weak to moderate nucleolar staining was observed in a few cases in a majority of cancer types. Most cases were negative.

GENE INFORMATION

Gene name

PCP4 (HGNC Symbol)

Synonyms

PEP-19

Description

Purkinje cell protein 4 (HGNC Symbol)

Entrez gene summary

Chromosome

21

Cytoband

q22.2

Chromosome location (bp)

39867317 - 39929397

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000183036 (version 83.38)

Entrez gene

5121

UniProt

P48539 (UniProt - Evidence at protein level)

neXtProt

NX_P48539

Antibodypedia

PCP4 antibodies

PROTEIN BROWSER

PCP4-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PCP4-001
ENSP00000329403
ENST00000328619
P48539 [Direct mapping]
Purkinje cell protein 4
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0001649 [osteoblast differentiation]
GO:0003723 [RNA binding]
GO:0005516 [calmodulin binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005883 [neurofilament]
GO:0006469 [negative regulation of protein kinase activity]
GO:0006970 [response to osmotic stress]
GO:0007417 [central nervous system development]
GO:0010976 [positive regulation of neuron projection development]
GO:0030424 [axon]
GO:0033603 [positive regulation of dopamine secretion]
GO:0043005 [neuron projection]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:1904009 [cellular response to monosodium glutamate]
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62 aa
6.8 kDa
No 0

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The Human Protein Atlas project is funded
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