Cell atlas - EFHC2 - The Human Protein Atlas

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EFHC2

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	EFHC2
Gene description	EF-hand domain (C-terminal) containing 2
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Group enriched (HMC-1, HEL, CAPAN-2)
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Group enriched (HMC-1, HEL, CAPAN-2) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	EFHC2 (HGNC Symbol)
Synonyms	FLJ22843, MRX74
Description	EF-hand domain (C-terminal) containing 2 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein which contains three DM10 domains and three calcium-binding EF-hand motifs. A related protein is encoded by a gene on chromosome 6. It has been suggested that both proteins are involved in the development of epilepsy (PMID: 15258581, 16112844) and that this gene may be associated with fear recognition in individuals with Turner syndrome. [provided by RefSeq, Aug 2011]
Chromosome	X
Cytoband	p11.3
Chromosome location (bp)	44147882 - 44343672
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000183690 (version 83.38)
Entrez gene	80258
UniProt	Q5JST6 (UniProt - Evidence at protein level)
neXtProt	NX_Q5JST6
Antibodypedia	EFHC2 antibodies

PROTEIN BROWSER

EFHC2-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
EFHC2-001 ENSP00000404232 ENST00000420999	Q5JST6 [Direct mapping] EF-hand domain-containing family member C2 Show all	Predicted intracellular proteins Show all	GO:0005509 [calcium ion binding] GO:0005515 [protein binding] Show all	749 aa 87.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.