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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.4TPM
GTEx:4.5RPKM
FANTOM5:6.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA003187

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA003187

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

10.4
N/A Female, age 80 Sample 1
TPM: 9.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 9.1
N/A Female, age 57 Sample 3
TPM: 9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 14.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 9.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

4.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 3.8
Samples: 350

Max RPKM: 8.5
Min RPKM: 1.3
Std RPKM: 1.0
Median RPKM: 3.7
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 8.5
GTEX-ZAK1-0226-SM-5CVMX 50-59 years, female 8.0
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 7.8
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 7.8
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 7.0
GTEX-YJ8O-2426-SM-5HL7S 40-49 years, female 6.8
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 6.4
GTEX-11XUK-2126-SM-5EQLR 40-49 years, female 6.4
GTEX-QLQW-1226-SM-2S1Q9 30-39 years, male 6.2
GTEX-11O72-0226-SM-59869 40-49 years, male 6.1
Show all
Adipose - Visceral (Omentum)
RPKM: 5.5
Samples: 227

Max RPKM: 15.3
Min RPKM: 2.1
Std RPKM: 1.8
Median RPKM: 5.2
GTEX-11XUK-1726-SM-5GU61 40-49 years, female 15.3
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 13.3
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 13.2
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 11.1
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 9.7
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 9.4
GTEX-ZPIC-0726-SM-57WFM 40-49 years, female 9.0
GTEX-1313W-1626-SM-5J1OE 50-59 years, female 8.5
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 8.5
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 8.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

6.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 6.3
FF:10010-101C1 65,65,76 years, mixed 6.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.