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ESOPHAGUS - Expression summary

RNA expression
HPA:19.2TPM
GTEx:3.5RPKM
FANTOM5:20.0Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

19.2
overview Female, age 70 Sample 1
TPM: 44.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 6.4
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 6.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 3.5
Samples: 286

Max RPKM: 12.4
Min RPKM: 0.7
Std RPKM: 1.6
Median RPKM: 3.1
GTEX-11TUW-1326-SM-5EQKV 60-69 years, male 12.4
GTEX-T5JC-1726-SM-4DM6U 20-29 years, male 12.4
GTEX-13OVJ-1226-SM-5L3HA 50-59 years, female 8.2
GTEX-11ONC-1526-SM-5GU6S 60-69 years, male 8.1
GTEX-N7MT-0326-SM-48TDP 60-69 years, female 8.1
GTEX-148VJ-1026-SM-5LU98 70-79 years, male 8.0
GTEX-1212Z-2126-SM-5FQTM 60-69 years, male 7.4
GTEX-OXRP-0926-SM-48TC1 60-69 years, female 7.2
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 7.1
GTEX-13PVQ-1726-SM-5IFF3 50-59 years, male 6.9
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

20.0

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 20.0
FF:10015-101C6 68,74,75 years, mixed 20.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.