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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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KLHDC8B
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    TISSUE

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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

KLHDC8B

Gene description

Kelch domain containing 8B

Protein class

Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Supported based on 2 antibodies.
HPA008463 , HPA014467
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PROGNOSTIC SUMMARY

Prognostic marker in lung cancer (favourable).
Lung cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA008463
HPA014467

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer cells showed moderate cytoplasmic immunoreactivity. Strong staining was observed in a few endometrial cancers.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Gliomas showed strong cytoplasmic staining. Several moderately stained cases were observed in breast, ovarian, gastric and pancreatic cancers. Remaining cancers were in general negative.

GENE INFORMATION

Gene name

KLHDC8B (HGNC Symbol)

Synonyms

MGC35097

Description

Kelch domain containing 8B (HGNC Symbol)

Entrez gene summary

This gene encodes a protein which forms a distinct beta-propeller protein structure of kelch domains allowing for protein-protein interactions. Mutations in this gene have been associated with Hodgkin lymphoma. [provided by RefSeq, Sep 2010]

Chromosome

3

Cytoband

p21.31

Chromosome location (bp)

49171611 - 49176486

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000185909 (version 83.38)

Entrez gene

200942

UniProt

Q8IXV7 (UniProt - Evidence at transcript level)

neXtProt

NX_Q8IXV7

Antibodypedia

KLHDC8B antibodies

PROTEIN BROWSER

KLHDC8B-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

KLHDC8B-001
ENSP00000327468
ENST00000332780
Q8IXV7 [Direct mapping]
Kelch domain-containing protein 8B
A0A024R2X4 [Target identity:100%; Query identity:100%]
Kelch domain containing 8B, isoform CRA_b
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Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
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GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
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354 aa
37.7 kDa
No 0

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