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LRRC16B

COLON - Expression summary

RNA expression
HPA:0.2TPM
GTEx:0.5RPKM
FANTOM5:0.5Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA030596

  

Endothelial cells

 Medium  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.2
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 0.9
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 0.8
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 0.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 0.7
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 0.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 0.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 0.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 0.7
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 2.8
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 2.8
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 2.4
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 1.7
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 1.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 1.6
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 1.5
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 1.5
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 1.5
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 1.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 1.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.5
FF:10014-101C5 62,83,84 years, mixed 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.