Fields »
ABOUT
HELP
BLOG
BCAM

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.8TPM
GTEx:19.8RPKM
FANTOM5:45.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA005654

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

13.8
overview Male, age 54 Sample 1
TPM: 11.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 51.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

19.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.9
Samples: 149

Max RPKM: 61.3
Min RPKM: 6.1
Std RPKM: 10.0
Median RPKM: 17.1
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 61.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 56.6
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 54.3
GTEX-145LS-2926-SM-5O99G 60-69 years, female 45.9
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 40.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 39.9
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 38.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 37.7
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 36.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 36.1
Show all
Colon - Transverse
RPKM: 19.8
Samples: 196

Max RPKM: 141.4
Min RPKM: 5.9
Std RPKM: 16.0
Median RPKM: 14.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 141.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 102.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 89.5
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 69.3
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 63.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 60.3
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 59.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 58.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 56.8
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 47.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

45.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 45.8
FF:10014-101C5 62,83,84 years, mixed 45.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.