Tissue expression of FAM9C - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	FAM9C
Gene description	Family with sequence similarity 9, member C
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enriched (spleen)
GTEx:	Group enriched (spleen, testis)
FANTOM5:	Group enriched (spleen, testis)

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (spleen)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Group enriched (spleen, testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Group enriched (spleen, testis)

GENE INFORMATION
Gene name	FAM9C (HGNC Symbol)
Synonyms	TEX39C
Description	Family with sequence similarity 9, member C (HGNC Symbol)
Entrez gene summary	This gene is a member of a gene family which arose through duplication on the X chromosome. The encoded protein may be localized to the nucleus as the protein contains several nuclear localization signals, and has similarity to a synaptonemal complex protein. [provided by RefSeq, Aug 2011]
Chromosome	X
Cytoband	p22.2
Chromosome location (bp)	13035618 - 13044682
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000187268 (version 83.38)
Entrez gene	171484
UniProt	Q8IZT9 (UniProt - Evidence at protein level)
neXtProt	NX_Q8IZT9
Antibodypedia	FAM9C antibodies

PROTEIN BROWSER

FAM9C-001	FAM9C-002	FAM9C-003	FAM9C-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM9C-001 ENSP00000369999 ENST00000380625	Q8IZT9 [Direct mapping] Protein FAM9C A0A024RBW5 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member C, isoform CRA_b Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	166 aa 19.2 kDa	No	0
FAM9C-002 ENSP00000409506 ENST00000438997	H7C346 [Direct mapping] Protein FAM9C Show all	Predicted intracellular proteins Show all	GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	126 aa 14.7 kDa	No	0
FAM9C-003 ENSP00000334430 ENST00000333995	Q8IZT9 [Direct mapping] Protein FAM9C A0A024RBW5 [Target identity:100%; Query identity:100%] Family with sequence similarity 9, member C, isoform CRA_b Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0007286 [spermatid development] Show all	166 aa 19.2 kDa	No	0
FAM9C-201 ENSP00000439185 ENST00000542843	G3V1I3 [Direct mapping] Family with sequence similarity 9, member C, isoform CRA_a; Protein FAM9C Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005634 [nucleus] GO:0007286 [spermatid development] GO:0016021 [integral component of membrane] Show all	128 aa 14.8 kDa	No	1