Expression of ZBED6CL in cancer - Summary - The Human Protein Atlas

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ZBED6CL

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ZBED6CL
Gene description	ZBED6 C-terminal like
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Cell line enhanced (HDLM-2, K-562)
HPA (normal tissue):	Tissue enhanced (adrenal gland, parathyroid gland)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data.
Reliability score	Approved based on 1 antibody. HPA019724
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (unfavourable), pancreatic cancer (favourable), glioma (unfavourable) and breast cancer (favourable).
Renal cancer p<0.001 Pancreatic cancer p<0.001 Glioma p<0.001 Breast cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA019724

GENE INFORMATION
Gene name	ZBED6CL (HGNC Symbol)
Synonyms	C7orf29
Description	ZBED6 C-terminal like (HGNC Symbol)
Entrez gene summary
Chromosome	7
Cytoband	q36.1
Chromosome location (bp)	150329789 - 150332721
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000188707 (version 83.38)
Entrez gene	113763
UniProt	Q96FA7 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96FA7
Antibodypedia	ZBED6CL antibodies

PROTEIN BROWSER

ZBED6CL-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZBED6CL-001 ENSP00000343242 ENST00000343855	Q96FA7 [Direct mapping] ZBED6 C-terminal-like protein A0A090N8P6 [Target identity:100%; Query identity:100%] Chromosome 7 open reading frame 29 Show all	Predicted intracellular proteins Show all		236 aa 26.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.