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STK40

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.5TPM
GTEx:20.3RPKM
FANTOM5:23.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA008026

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

19.5
overview Male, age 54 Sample 1
TPM: 22.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 23.8
Samples: 149

Max RPKM: 41.9
Min RPKM: 12.1
Std RPKM: 5.8
Median RPKM: 22.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 41.9
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 40.0
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 39.6
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 39.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 39.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 37.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 37.1
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 34.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 34.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 34.7
Show all
Colon - Transverse
RPKM: 17.7
Samples: 196

Max RPKM: 71.5
Min RPKM: 9.8
Std RPKM: 7.0
Median RPKM: 15.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 71.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 54.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 46.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 37.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 33.7
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 31.9
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 28.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 28.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 27.9
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 27.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

23.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 23.6
FF:10014-101C5 62,83,84 years, mixed 23.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.