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XRCC6

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:138.7TPM
GTEx:80.4RPKM
FANTOM5:129.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA047549

  

Antibody HPA062226

  

Antibody CAB004254

  

Adipocytes

 Medium   Not detected   High  

Chondrocytes

 High   Medium  

Fibroblasts

 High   Medium   High  

Peripheral nerve

 High   High  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA047549

  

Antibody HPA062226

  

Antibody CAB004254

  

Adipocytes

 Medium   Not detected   High  

Fibroblasts

 High   Medium   High  

Peripheral nerve

 Low   Medium   High  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

138.7
N/A Female, age 80 Sample 1
TPM: 133.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 104.9
N/A Female, age 57 Sample 3
TPM: 100.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 213.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 140.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

80.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 83.0
Samples: 350

Max RPKM: 112.8
Min RPKM: 57.5
Std RPKM: 9.2
Median RPKM: 82.5
GTEX-139YR-2426-SM-5J1OB 50-59 years, male 112.8
GTEX-1399U-2426-SM-5K7XB 50-59 years, female 112.4
GTEX-13RTJ-2526-SM-5S2Q3 60-69 years, male 111.5
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 109.1
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 108.0
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 106.1
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 105.3
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 104.7
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 104.6
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 104.3
Show all
Adipose - Visceral (Omentum)
RPKM: 76.5
Samples: 227

Max RPKM: 138.8
Min RPKM: 52.9
Std RPKM: 11.7
Median RPKM: 74.5
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 138.8
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 118.4
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 112.9
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 112.1
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 101.5
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 101.2
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 100.0
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 99.9
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 99.5
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 99.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

129.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 129.9
FF:10010-101C1 65,65,76 years, mixed 129.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.