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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GK2
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GK2

Gene description

Glycerol kinase 2

Protein class

Enzymes
Plasma proteins
Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Not detected
HPA (cell line):Cell line enriched (SCLC-21H)
HPA (normal tissue):Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY

Data reliability
description

RNA-based expert annotation gave inconclusive results. Caution, targets protein from more than one gene.

Reliability score

Uncertain based on 1 antibody.
HPA060687
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA060687

Cancer

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Cancer

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Hepatocellular carcinomas and thyroid cancers showed moderate to strong cytoplasmic staining. Few cases of endometrial and prostate cancers displayed moderate positivity. Remaining cancer tissues were negative.

GENE INFORMATION

Gene name

GK2 (HGNC Symbol)

Synonyms

GKP2, GKTA

Description

Glycerol kinase 2 (HGNC Symbol)

Entrez gene summary

Chromosome

4

Cytoband

q21.21

Chromosome location (bp)

79406352 - 79408293

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000196475 (version 83.38)

Entrez gene

2712

UniProt

Q14410 (UniProt - Evidence at transcript level)

neXtProt

NX_Q14410

Antibodypedia

GK2 antibodies

PROTEIN BROWSER

GK2-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GK2-001
ENSP00000351706
ENST00000358842
Q14410 [Direct mapping]
Glycerol kinase 2
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Enzymes
   ENZYME proteins
   Transferases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Plasma proteins
Protein evidence (Kim et al 2014)
Show all
GO:0004370 [glycerol kinase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005741 [mitochondrial outer membrane]
GO:0005975 [carbohydrate metabolic process]
GO:0006071 [glycerol metabolic process]
GO:0006072 [glycerol-3-phosphate metabolic process]
GO:0006641 [triglyceride metabolic process]
GO:0016310 [phosphorylation]
GO:0016773 [phosphotransferase activity, alcohol group as acceptor]
GO:0019563 [glycerol catabolic process]
GO:0046167 [glycerol-3-phosphate biosynthetic process]
GO:0070062 [extracellular exosome]
Show all
553 aa
60.6 kDa
No 2

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