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MAGEA6
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

MAGEA6

Gene description

Melanoma antigen family A6

Protein class

Cancer-related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (HMC-1, K-562, PC-3, U-266/70)
HPA (normal tissue):Tissue enriched (testis)

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (unfavourable).
Liver cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

MAGEA6 (HGNC Symbol)

Synonyms

CT1.6, MAGE6

Description

Melanoma antigen family A6 (HGNC Symbol)

Entrez gene summary

This gene is a member of the MAGEA gene family. The members of this family encode proteins with 50 to 80% sequence identity to each other. The promoters and first exons of the MAGEA genes show considerable variability, suggesting that the existence of this gene family enables the same function to be expressed under different transcriptional controls. The MAGEA genes are clustered at chromosomal location Xq28. They have been implicated in some hereditary disorders, such as dyskeratosis congenita. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

Chromosome

X

Cytoband

q28

Chromosome location (bp)

152766136 - 152769747

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000197172 (version 83.38)

Entrez gene

4105

UniProt

P43360 (UniProt - Evidence at protein level)

neXtProt

NX_P43360

Antibodypedia

MAGEA6 antibodies

PROTEIN BROWSER

MAGEA6-001
MAGEA6-002
MAGEA6-003
MAGEA6-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MAGEA6-001
ENSP00000329199
ENST00000329342
P43360 [Direct mapping]
Melanoma-associated antigen 6
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Cancer-related genes
   Candidate cancer biomarkers
Show all
GO:0003674 [molecular_function]
GO:0005515 [protein binding]
GO:0005575 [cellular_component]
GO:0008150 [biological_process]
Show all
314 aa
34.9 kDa
No 0
MAGEA6-002
ENSP00000403303
ENST00000412733
E7EUF2 [Direct mapping]
Melanoma-associated antigen 6
Show all
Predicted intracellular proteins
Show all
201 aa
21.9 kDa
No 0
MAGEA6-003
ENSP00000401806
ENST00000457643
E7ETG4 [Direct mapping]
Melanoma-associated antigen 6
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Show all
235 aa
25.7 kDa
No 0
MAGEA6-201
ENSP00000480637
ENST00000616035
P43360 [Direct mapping]
Melanoma-associated antigen 6
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Cancer-related genes
   Candidate cancer biomarkers
Show all
GO:0003674 [molecular_function]
GO:0005515 [protein binding]
GO:0005575 [cellular_component]
GO:0008150 [biological_process]
Show all
314 aa
34.9 kDa
No 0

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