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OGDHL

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.9TPM
GTEx:0.7RPKM
FANTOM5:2.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
 

Antibody staining

Antibody HPA052497

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

0.9
overview Male, age 54 Sample 1
TPM: 1.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 2.3
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 2.3
GTEX-12696-1926-SM-5EGJT 60-69 years, male 2.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 2.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 1.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 1.8
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 1.7
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 1.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 1.6
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 1.6
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.6
Show all
Colon - Transverse
RPKM: 0.8
Samples: 196

Max RPKM: 2.5
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.5
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 1.9
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 1.9
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 1.9
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 1.8
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 1.8
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 1.8
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 1.6
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 1.6
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 1.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

2.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 2.8
FF:10014-101C5 62,83,84 years, mixed 2.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.