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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:434.7RPKM
FANTOM5:2304.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA049222

 

Antibody CAB002300

 

Glial cells

Low   High  

Neuronal cells

Not detected   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

434.7

GTEx sample id

Sample description

RPKM

Brain - Caudate (basal ganglia)
RPKM: 434.7
Samples: 117

Max RPKM: 1806.7
Min RPKM: 66.2
Std RPKM: 315.5
Median RPKM: 346.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1806.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1532.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1511.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1424.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1215.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1116.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1005.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 994.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 953.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 944.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 939.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 873.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 794.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 777.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 760.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 747.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 736.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 691.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 680.9
GTEX-XOTO-0011-R5A-SM-4B657 50-59 years, male 678.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 642.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 637.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 631.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 587.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 542.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 533.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 527.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 523.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 516.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 504.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 476.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 468.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 467.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 465.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 458.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 447.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 430.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 428.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 426.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 413.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 411.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 411.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 410.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 407.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 407.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 406.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 399.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 395.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 385.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 381.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 379.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 377.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 375.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 373.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 367.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 362.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 359.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 356.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 346.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 337.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 337.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 329.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 324.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 323.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 319.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 319.6
GTEX-12WSB-0011-R5b-SM-5GU67 60-69 years, female 319.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 317.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 315.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 311.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 308.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 308.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 307.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 281.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 278.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 271.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 268.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 267.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 267.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 266.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 260.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 259.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 256.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 246.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 243.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 237.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 233.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 231.7
GTEX-OHPN-0011-R5A-SM-2I5FF 60-69 years, female 227.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 222.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 217.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 216.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 209.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 202.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 192.9
GTEX-RVPU-0011-R5A-SM-2XCAD 50-59 years, male 191.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 189.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 188.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 178.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 176.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 174.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 171.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 168.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 164.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 163.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 159.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 158.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 154.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 147.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 144.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 143.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 135.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 109.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 109.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

2304.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 2675.8
FF:10164-103B2 76 years, female 2675.8

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The Human Protein Atlas project is funded
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