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ZNF248

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.4TPM
GTEx:7.0RPKM
FANTOM5:8.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA018237

  

Antibody HPA018287

  

Antibody HPA018455

  

Endothelial cells

 Low   Medium   Low  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium   Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

6.4
overview Male, age 54 Sample 1
TPM: 6.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.2
Samples: 149

Max RPKM: 21.0
Min RPKM: 2.0
Std RPKM: 3.9
Median RPKM: 8.6
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 21.0
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 21.0
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 19.0
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 18.3
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 18.2
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 18.1
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 18.0
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 17.2
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 16.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 15.8
Show all
Colon - Transverse
RPKM: 5.3
Samples: 196

Max RPKM: 16.0
Min RPKM: 0.5
Std RPKM: 2.7
Median RPKM: 4.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 16.0
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 14.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 13.4
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 13.0
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 11.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 11.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 11.4
GTEX-11NSD-1626-SM-5986U 20-29 years, male 11.2
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 11.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 11.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.6
FF:10014-101C5 62,83,84 years, mixed 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.