Expression of RTP2 in cancer - Summary - The Human Protein Atlas

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RTP2

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	RTP2
Gene description	Receptor (chemosensory) transporter protein 2
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Cell line enriched (SK-BR-3)
HPA (normal tissue):	Tissue enhanced (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA026875
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA026875

GENE INFORMATION
Gene name	RTP2 (HGNC Symbol)
Synonyms	MGC78665, Z3CXXC2
Description	Receptor (chemosensory) transporter protein 2 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q27.3
Chromosome location (bp)	187698259 - 187702557
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000198471 (version 83.38)
Entrez gene	344892
UniProt	Q5QGT7 (UniProt - Evidence at protein level)
neXtProt	NX_Q5QGT7
Antibodypedia	RTP2 antibodies

PROTEIN BROWSER

RTP2-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RTP2-001 ENSP00000350976 ENST00000358241	Q5QGT7 [Direct mapping] Receptor-transporting protein 2 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0001580 [detection of chemical stimulus involved in sensory perception of bitter taste] GO:0005515 [protein binding] GO:0005622 [intracellular] GO:0005886 [plasma membrane] GO:0006612 [protein targeting to membrane] GO:0009986 [cell surface] GO:0016021 [integral component of membrane] GO:0031849 [olfactory receptor binding] GO:0051205 [protein insertion into membrane] Show all	225 aa 26.1 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.