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MT-CO1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28699.6TPM
GTEx:20365.0RPKM
FANTOM5:269.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA069328

  

Antibody CAB016241

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

28699.6
overview Male, age 54 Sample 1
TPM: 26235
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15959
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16098.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 39770
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13515.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 32316.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 40948.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39012.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 29863.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 19833.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 32843.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 28361.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 38337.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20365.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9233.2
Samples: 149

Max RPKM: 36442.3
Min RPKM: 805.6
Std RPKM: 6473.2
Median RPKM: 10063.5
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 36442.3
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 25308.4
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 24266.0
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 22586.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 21931.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 18926.3
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 18758.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 18702.6
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 18403.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 18293.2
Show all
Colon - Transverse
RPKM: 28827.5
Samples: 196

Max RPKM: 88493.3
Min RPKM: 697.6
Std RPKM: 17334.2
Median RPKM: 29655.0
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 88493.3
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 73052.4
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 73005.5
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 65909.0
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 64680.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 63300.1
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 62127.3
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 62103.2
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 61671.1
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 59579.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

269.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 269.3
FF:10014-101C5 62,83,84 years, mixed 269.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.