Expression of ARMCX6 in cancer - Summary - The Human Protein Atlas

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ARMCX6

TISSUE

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CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ARMCX6
Gene description	Armadillo repeat containing, X-linked 6
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Mixed
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression at variable levels in several different tissue types.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 2 antibodies. HPA043030 , HPA048125
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA043030	HPA048125

GENE INFORMATION
Gene name	ARMCX6 (HGNC Symbol)
Synonyms	FLJ20811, GASP10
Description	Armadillo repeat containing, X-linked 6 (HGNC Symbol)
Entrez gene summary
Chromosome	X
Cytoband	q22.1
Chromosome location (bp)	101615118 - 101618001
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000198960 (version 83.38)
Entrez gene	54470
UniProt	Q7L4S7 (UniProt - Evidence at transcript level)
neXtProt	NX_Q7L4S7
Antibodypedia	ARMCX6 antibodies

PROTEIN BROWSER

ARMCX6-001	ARMCX6-201	ARMCX6-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ARMCX6-001 ENSP00000354708 ENST00000361910	Q7L4S7 [Direct mapping] Protein ARMCX6 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	300 aa 33 kDa	No	1
ARMCX6-201 ENSP00000440648 ENST00000538627	Q7L4S7 [Direct mapping] Protein ARMCX6 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	300 aa 33 kDa	No	1
ARMCX6-202 ENSP00000444537 ENST00000539247	Q7L4S7 [Direct mapping] Protein ARMCX6 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	300 aa 33 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.