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BRD2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.0TPM
GTEx:48.0RPKM
FANTOM5:93.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA042816

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

29.0
overview Male, age 54 Sample 1
TPM: 32
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 46.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 14.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 50.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 29.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 42.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 31.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 23.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

48.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 49.2
Samples: 149

Max RPKM: 83.8
Min RPKM: 29.7
Std RPKM: 7.3
Median RPKM: 48.7
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 83.8
GTEX-1122O-1426-SM-5H11R 60-69 years, female 65.1
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 64.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 63.9
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 62.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 62.3
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 62.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 60.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 60.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 60.1
Show all
Colon - Transverse
RPKM: 47.1
Samples: 196

Max RPKM: 126.1
Min RPKM: 26.1
Std RPKM: 8.4
Median RPKM: 46.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 126.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 62.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 62.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 62.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 62.5
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 61.4
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 60.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 59.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 59.2
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 58.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

93.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 93.2
FF:10014-101C5 62,83,84 years, mixed 93.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.