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AIF1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.8TPM
GTEx:12.1RPKM
FANTOM5:46.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA049234

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

9.8
overview Male, age 54 Sample 1
TPM: 7.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

12.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.9
Samples: 149

Max RPKM: 49.1
Min RPKM: 1.5
Std RPKM: 6.4
Median RPKM: 8.5
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 49.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 42.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 27.5
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 27.0
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 25.0
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 23.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 21.8
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 20.4
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 17.2
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 17.1
Show all
Colon - Transverse
RPKM: 13.7
Samples: 196

Max RPKM: 39.4
Min RPKM: 0.9
Std RPKM: 7.5
Median RPKM: 12.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 39.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 39.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 37.7
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 37.3
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 36.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 35.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 34.0
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 32.8
GTEX-144GM-1226-SM-5LU52 20-29 years, male 31.5
GTEX-Q734-1126-SM-48TZY 40-49 years, female 31.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

46.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 46.1
FF:10014-101C5 62,83,84 years, mixed 46.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.