Expression of ZSCAN5CP in cancer - Summary - The Human Protein Atlas

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ZSCAN5CP

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ZSCAN5CP
Gene description	Zinc finger and SCAN domain containing 5C, pseudogene
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Not detected

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in selected tissues, most abundant in Leydig cells of testis.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. No RNA expression data detected and pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.
Reliability score	Uncertain based on 3 antibodies. HPA041263 , HPA043123 , HPA046836
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA041263	HPA043123	HPA046836

GENE INFORMATION
Gene name	ZSCAN5CP (HGNC Symbol)
Synonyms	ZNF495C, ZSCAN5C
Description	Zinc finger and SCAN domain containing 5C, pseudogene (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.43
Chromosome location (bp)	56202301 - 56209452
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000204532 (version 83.38)
Entrez gene
UniProt	A6NGD5 (UniProt - Uncertain)
neXtProt	NX_A6NGD5
Antibodypedia	ZSCAN5CP antibodies

PROTEIN BROWSER

ZSCAN5CP-001	ZSCAN5CP-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZSCAN5CP-001 ENSP00000435234 ENST00000534327	A6NGD5 [Direct mapping] Putative zinc finger and SCAN domain-containing protein 5C Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003676 [nucleic acid binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	496 aa 55.7 kDa	No	0
ZSCAN5CP-201 ENSP00000365443 ENST00000376267	A6NGD5 [Direct mapping] Putative zinc finger and SCAN domain-containing protein 5C Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003676 [nucleic acid binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	496 aa 55.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.