Fields »
ABOUT
HELP
BLOG
SLC35B4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.9TPM
GTEx:2.8RPKM
FANTOM5:9.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA049779

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

2.9
overview Male, age 54 Sample 1
TPM: 3.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.1
Samples: 149

Max RPKM: 5.6
Min RPKM: 1.4
Std RPKM: 0.6
Median RPKM: 3.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 5.6
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 5.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 4.7
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 4.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 4.4
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 4.3
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 4.2
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 4.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 4.1
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 4.0
Show all
Colon - Transverse
RPKM: 2.5
Samples: 196

Max RPKM: 5.9
Min RPKM: 0.5
Std RPKM: 0.8
Median RPKM: 2.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 5.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 4.5
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 4.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 4.1
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 4.1
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 4.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 4.1
GTEX-117YX-0826-SM-5H11J 50-59 years, male 4.0
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 4.0
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 4.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.4
FF:10014-101C5 62,83,84 years, mixed 9.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.