Fields »
ABOUT
HELP
BLOG
ARID3C

GENERAL INFORMATION

Gene name

 ARID3C

Gene description

 AT rich interactive domain 3C (BRIGHT-like)

Protein class

 Predicted intracellular proteins
Transcription factors

Predicted localization

 Intracellular

Number of transcripts

 1
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Group enriched (liver cancer, ovarian cancer)
HPA (cell line):Cell line enhanced (HDLM-2, Karpas-707, T-47d)
HPA (normal tissue):Tissue enriched (liver)

Protein evidence

 Evidence at transcript level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Group enriched (liver cancer, ovarian cancer)

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 ARID3C

Synonyms

Description

 AT rich interactive domain 3C (BRIGHT-like) (HGNC Symbol)

Entrez gene summary

 This gene is a member of the ARID (AT-rich interaction domain) family of proteins. The ARID domain is a helix-turn-helix motif-based DNA-binding domain. ARID family members have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation and possibly in chromatin structure modification. [provided by RefSeq, Jul 2008]

Chromosome

 9

Cytoband

 p13.3

Chromosome location (bp)

 34621379 - 34628107

Protein evidence

 Evidence at transcript level (all genes)

Ensembl

 ENSG00000205143 (version 83.38)

Entrez gene

 138715

UniProt

 A6NKF2 (UniProt - Inferred from homology)

neXtProt

 NX_A6NKF2

Antibodypedia

 ARID3C antibodies

PROTEIN BROWSER
ARID3C-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
ARID3C-002
ENSP00000368189
ENST00000378909
A6NKF2 [Direct mapping]
AT-rich interactive domain-containing protein 3C
Show all
Predicted intracellular proteins
Transcription factors
   Helix-turn-helix domains
Show all
GO:0003677 [DNA binding]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0045121 [membrane raft]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
Show all
 412 aa
44.1 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.