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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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EXOC3L4
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

EXOC3L4

Gene description

Exocyst complex component 3-like 4

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enhanced (liver cancer)
HPA (cell line):Cell line enhanced (HDLM-2, HEL, Hep G2, RPMI-8226)
HPA (normal tissue):Tissue enhanced (duodenum)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY

Data reliability
description

RNA-based expert annotation gave inconclusive results. Pending external verification.

Reliability score

Uncertain based on 1 antibody.
HPA043661
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PROGNOSTIC SUMMARY

Prognostic marker in colorectal cancer (unfavourable).
Colorectal cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enhanced (liver cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Pancreatic cancer

STAINING SUMMARY

HPA043661

Cancer

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Cancer

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

The majority of malignant cells showed weak to moderate cytoplasmic immunoreactivity with additional membranous positivity in several cases. Several pancreatic cancers along with a few colorectal cancers were strongly stained. Malignant lymphomas and several cases of skin, prostate, breast, cervical and endometrial cancers were negative.

GENE INFORMATION

Gene name

EXOC3L4 (HGNC Symbol)

Synonyms

C14orf73

Description

Exocyst complex component 3-like 4 (HGNC Symbol)

Entrez gene summary

Chromosome

14

Cytoband

q32.32

Chromosome location (bp)

103100144 - 103110559

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000205436 (version 83.38)

Entrez gene

91828

UniProt

Q17RC7 (UniProt - Evidence at protein level)

neXtProt

NX_Q17RC7

Antibodypedia

EXOC3L4 antibodies

PROTEIN BROWSER

EXOC3L4-001
EXOC3L4-005
EXOC3L4-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

EXOC3L4-001
ENSP00000369409
ENST00000380069
Q17RC7 [Direct mapping]
Exocyst complex component 3-like protein 4
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000145 [exocyst]
GO:0000149 [SNARE binding]
GO:0006887 [exocytosis]
GO:0051601 [exocyst localization]
Show all
722 aa
79.9 kDa
No 0
EXOC3L4-005
ENSP00000454163
ENST00000559116
H0YNV0 [Direct mapping]
Exocyst complex component 3-like protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000145 [exocyst]
GO:0000149 [SNARE binding]
GO:0006887 [exocytosis]
GO:0051601 [exocyst localization]
Show all
153 aa
16.7 kDa
No 0
EXOC3L4-007
ENSP00000454036
ENST00000560304
H0YNJ4 [Direct mapping]
Exocyst complex component 3-like protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000145 [exocyst]
GO:0000149 [SNARE binding]
GO:0006887 [exocytosis]
GO:0051601 [exocyst localization]
Show all
212 aa
23.7 kDa
No 0

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