Tissue expression of CCDC85C - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	20.0	TPM
GTEx:	2.7	RPKM
FANTOM5:	56.6	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA058346
Glandular cells	Low

SMALL INTESTINE - HPA RNA-seq

Average TPM	20.0

Male, age 65

Sample 1
TPM: 17.6

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 19.9

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 24

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 18.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	2.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 2.7

Samples: 88

Max RPKM: 6.6
Min RPKM: 0.5
Std RPKM: 1.3
Median RPKM: 2.5

GTEX-YF7O-1826-SM-5IFIU

50-59 years, male

6.6

GTEX-14DAR-1426-SM-5RQIR

50-59 years, male

5.6

GTEX-ZTX8-0526-SM-59HLD

20-29 years, male

5.4

GTEX-ZTSS-0926-SM-59865

40-49 years, male

5.2

GTEX-YB5E-1526-SM-5IFIE

40-49 years, male

4.9

GTEX-ZF2S-1726-SM-57WFT

50-59 years, female

4.9

GTEX-ZVZP-1826-SM-5GZXB

50-59 years, male

4.8

GTEX-13FTW-2026-SM-5IJE2

40-49 years, male

4.7

GTEX-ZZ64-0526-SM-5GZXM

20-29 years, male

4.7

GTEX-13D11-0726-SM-5LZZB

50-59 years, female

4.6

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	56.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 56.6

FF:10024-101D6

15,40,85 years, mixed

56.6