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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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TMSB4X
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

TMSB4X

Gene description

Thymosin beta 4, X-linked

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
CAB033806
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

CAB033806

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Fractions of cases in for example malignant lymphomas and gastric cancers showed moderate cytoplasmic staining. Remaining cancers were weakly stained or negative.

GENE INFORMATION

Gene name

TMSB4X (HGNC Symbol)

Synonyms

TB4X, TMSB4

Description

Thymosin beta 4, X-linked (HGNC Symbol)

Entrez gene summary

This gene encodes an actin sequestering protein which plays a role in regulation of actin polymerization. The protein is also involved in cell proliferation, migration, and differentiation. This gene escapes X inactivation and has a homolog on chromosome Y. [provided by RefSeq, Jul 2008]

Chromosome

X

Cytoband

p22.2

Chromosome location (bp)

12975108 - 12977227

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000205542 (version 83.38)

Entrez gene

7114

UniProt

P62328 (UniProt - Evidence at protein level)

neXtProt

NX_P62328

Antibodypedia

TMSB4X antibodies

PROTEIN BROWSER

TMSB4X-001
TMSB4X-002
TMSB4X-003
TMSB4X-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TMSB4X-001
ENSP00000370009
ENST00000380635
P62328 [Direct mapping]
Thymosin beta-4 Hematopoietic system regulatory peptide
A2VCK8 [Target identity:100%; Query identity:100%]
Thymosin beta 4, X-linked; Thymosin, beta 4, X-linked, isoform CRA_a; cDNA, FLJ92006, Homo sapiens thymosin, beta 4, X chromosome (TMSB4X), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002576 [platelet degranulation]
GO:0003785 [actin monomer binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005856 [cytoskeleton]
GO:0007015 [actin filament organization]
GO:0007596 [blood coagulation]
GO:0030168 [platelet activation]
GO:0031093 [platelet alpha granule lumen]
GO:0042989 [sequestering of actin monomers]
GO:0044822 [poly(A) RNA binding]
Show all
44 aa
5.1 kDa
No 0
TMSB4X-002
ENSP00000414376
ENST00000451311
P62328 [Direct mapping]
Thymosin beta-4 Hematopoietic system regulatory peptide
A2VCK8 [Target identity:100%; Query identity:100%]
Thymosin beta 4, X-linked; Thymosin, beta 4, X-linked, isoform CRA_a; cDNA, FLJ92006, Homo sapiens thymosin, beta 4, X chromosome (TMSB4X), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002576 [platelet degranulation]
GO:0003785 [actin monomer binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005856 [cytoskeleton]
GO:0007015 [actin filament organization]
GO:0007596 [blood coagulation]
GO:0030168 [platelet activation]
GO:0031093 [platelet alpha granule lumen]
GO:0042989 [sequestering of actin monomers]
GO:0044822 [poly(A) RNA binding]
Show all
44 aa
5.1 kDa
No 0
TMSB4X-003
ENSP00000370010
ENST00000380636
P62328 [Direct mapping]
Thymosin beta-4 Hematopoietic system regulatory peptide
A2VCK8 [Target identity:100%; Query identity:100%]
Thymosin beta 4, X-linked; Thymosin, beta 4, X-linked, isoform CRA_a; cDNA, FLJ92006, Homo sapiens thymosin, beta 4, X chromosome (TMSB4X), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002576 [platelet degranulation]
GO:0003785 [actin monomer binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005856 [cytoskeleton]
GO:0007015 [actin filament organization]
GO:0007596 [blood coagulation]
GO:0030168 [platelet activation]
GO:0031093 [platelet alpha granule lumen]
GO:0042989 [sequestering of actin monomers]
GO:0044822 [poly(A) RNA binding]
Show all
44 aa
5.1 kDa
No 0
TMSB4X-004
ENSP00000370007
ENST00000380633
P62328 [Direct mapping]
Thymosin beta-4 Hematopoietic system regulatory peptide
A2VCK8 [Target identity:100%; Query identity:100%]
Thymosin beta 4, X-linked; Thymosin, beta 4, X-linked, isoform CRA_a; cDNA, FLJ92006, Homo sapiens thymosin, beta 4, X chromosome (TMSB4X), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002576 [platelet degranulation]
GO:0003785 [actin monomer binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005856 [cytoskeleton]
GO:0007015 [actin filament organization]
GO:0007596 [blood coagulation]
GO:0030168 [platelet activation]
GO:0031093 [platelet alpha granule lumen]
GO:0042989 [sequestering of actin monomers]
GO:0044822 [poly(A) RNA binding]
Show all
44 aa
5.1 kDa
No 0

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