We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HLA-A
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS BREAST

GENE/PROTEIN

Dictionary

Breast

BREAST - Expression summary

RNA expression

HPA:64.4TPM
GTEx:232.7RPKM
FANTOM5:247.4Tags Per Million

BREAST - Annotated protein expression

Pending normal tissue analysis


BREAST - HPA RNA-seq

Average TPM

64.4

overview Female, age 52 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 257.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 0.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 0.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

232.7

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 232.7
Samples: 214

Max RPKM: 617.4
Min RPKM: 58.1
Std RPKM: 88.7
Median RPKM: 211.1
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 617.4
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 498.0
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 442.1
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 441.7
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 438.4
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 438.3
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 435.4
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 410.8
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 408.0
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 397.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 391.1
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 384.6
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 384.3
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 381.2
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 378.5
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 375.8
GTEX-11OF3-1926-SM-59889 60-69 years, male 370.1
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 366.5
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 363.8
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 359.1
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 353.3
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 352.8
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 351.5
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 347.9
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 343.0
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 342.2
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 337.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 337.4
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 334.7
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 333.0
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 328.5
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 328.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 325.9
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 325.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 323.6
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 321.8
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 317.3
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 317.0
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 314.9
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 313.5
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 313.4
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 313.2
GTEX-13113-1726-SM-5GCOO 60-69 years, female 310.7
GTEX-117XS-1926-SM-5GICO 60-69 years, male 310.6
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 309.4
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 306.4
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 304.8
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 300.7
GTEX-144GM-0926-SM-5O994 20-29 years, male 297.7
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 293.9
GTEX-11P81-1926-SM-5BC53 30-39 years, female 293.5
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 287.8
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 286.4
GTEX-1192X-2326-SM-5987X 50-59 years, male 285.9
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 285.9
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 283.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 282.0
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 279.5
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 279.3
GTEX-14753-2426-SM-5LU8U 60-69 years, male 276.3
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 275.1
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 273.1
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 271.4
GTEX-QVJO-1826-SM-447C9 60-69 years, female 271.1
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 270.3
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 270.2
GTEX-XBED-1626-SM-47JYN 60-69 years, male 269.8
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 269.6
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 266.9
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 266.7
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 264.7
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 263.1
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 262.5
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 261.7
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 259.5
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 257.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 257.6
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 256.4
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 255.6
GTEX-R53T-1526-SM-48FEK 50-59 years, female 252.7
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 252.7
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 251.6
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 250.2
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 249.6
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 248.8
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 248.7
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 244.8
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 243.7
GTEX-1122O-1226-SM-5H113 60-69 years, female 242.9
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 241.3
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 240.7
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 239.4
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 238.4
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 235.6
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 235.4
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 234.3
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 232.3
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 229.5
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 227.8
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 226.6
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 225.7
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 225.0
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 221.6
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 219.9
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 219.8
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 211.5
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 211.3
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 211.0
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 209.4
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 208.2
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 206.6
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 204.0
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 203.2
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 202.1
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 202.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 201.0
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 200.1
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 200.1
GTEX-QEL4-2126-SM-447AE 50-59 years, male 200.1
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 197.7
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 197.3
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 196.0
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 193.6
GTEX-RU72-0626-SM-46MUI 50-59 years, female 193.4
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 193.3
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 192.1
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 191.5
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 191.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 190.9
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 190.6
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 188.8
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 188.3
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 187.2
GTEX-T6MN-0726-SM-32PML 50-59 years, male 186.7
GTEX-X261-0626-SM-3NMD9 50-59 years, male 186.2
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 186.2
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 185.3
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 185.2
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 184.5
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 183.5
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 183.0
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 182.9
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 182.8
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 180.4
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 180.0
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 178.5
GTEX-TML8-1226-SM-32QON 40-49 years, female 178.5
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 178.3
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 177.8
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 177.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 176.0
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 175.5
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 175.1
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 174.3
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 173.9
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 173.5
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 173.2
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 172.7
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 172.2
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 171.6
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 170.8
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 169.3
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 167.6
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 167.3
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 163.4
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 163.1
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 162.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 162.7
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 161.5
GTEX-WFON-1826-SM-3GILG 40-49 years, male 160.9
GTEX-REY6-2426-SM-48FF5 60-69 years, male 160.7
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 160.3
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 157.8
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 156.8
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 156.6
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 156.1
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 152.7
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 152.7
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 150.9
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 150.6
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 149.1
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 147.3
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 145.5
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 144.0
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 143.1
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 142.5
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 141.8
GTEX-R55D-0826-SM-48FEA 50-59 years, male 139.6
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 138.2
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 135.6
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 134.4
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 132.9
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 127.0
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 126.2
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 126.1
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 125.4
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 125.2
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 124.2
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 122.3
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 118.8
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 118.6
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 116.7
GTEX-117YX-1426-SM-5H12H 50-59 years, male 115.7
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 114.9
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 112.5
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 112.3
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 111.6
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 109.5
GTEX-S341-1526-SM-4AD6K 40-49 years, female 106.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 105.2
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 103.3
GTEX-11P82-1326-SM-5HL62 20-29 years, male 87.3
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 69.0
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 58.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

247.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 247.4
FF:10080-102A8 77 years, female 247.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.