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HLA-A

COLON - Expression summary

RNA expression
HPA:146.6TPM
GTEx:232.3RPKM
FANTOM5:1019.8Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

146.6
overview Male, age 54 Sample 1
TPM: 2.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 28.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 693.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 638.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 493.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 33.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

232.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 137.5
Samples: 149

Max RPKM: 329.6
Min RPKM: 36.9
Std RPKM: 55.3
Median RPKM: 129.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 329.6
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 322.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 320.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 278.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 274.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 269.5
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 266.9
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 253.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 248.9
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 247.1
Show all
Colon - Transverse
RPKM: 304.5
Samples: 196

Max RPKM: 1010.6
Min RPKM: 71.7
Std RPKM: 158.4
Median RPKM: 282.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 1010.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 740.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 720.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 700.1
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 678.3
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 677.9
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 673.7
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 669.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 654.3
GTEX-139YR-2126-SM-5KM11 50-59 years, male 595.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1019.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1019.8
FF:10014-101C5 62,83,84 years, mixed 1019.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.