We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HLA-A
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS HIPPOCAMPUS

GENE/PROTEIN

Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

RNA expression

GTEx:57.2RPKM
FANTOM5:78.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Pending normal tissue analysis


HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

57.2

GTEx sample id

Sample description

RPKM

42.754.566.216.399.30102030405060708090100110120130140
42.754.566.216.399.30102030405060708090100110120130140
Brain - Hippocampus
RPKM: 57.2
Samples: 94

Max RPKM: 140.8
Min RPKM: 16.3
Std RPKM: 22.2
Median RPKM: 54.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 140.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 130.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 104.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 102.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 99.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 97.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 97.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 93.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 91.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 88.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 88.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 84.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 77.1
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 76.0
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 76.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 73.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 72.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 71.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 70.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 70.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 68.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 66.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 66.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 66.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 65.4
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 64.8
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 64.8
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 62.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 62.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 62.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 62.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 61.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 61.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 60.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 60.7
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 60.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 60.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 60.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 59.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 59.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 59.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 58.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 58.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 57.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 57.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 54.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 54.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 54.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 53.4
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 53.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 52.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 49.9
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 49.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 49.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 49.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 49.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 49.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 48.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 48.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 48.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 48.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 47.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 47.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 47.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 45.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 45.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 44.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 43.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 42.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 42.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 40.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 40.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.3
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 40.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 37.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 36.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 33.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 33.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 33.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 32.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 30.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 28.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 28.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 27.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 27.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 23.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 20.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 16.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

78.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 114.2
FF:10153-102I9 76 years, female 179.1
FF:10169-103B7 60 years, female 49.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.