Expression of CTAGE1 in cancer - Summary - The Human Protein Atlas

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CTAGE1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CTAGE1
Gene description	Cutaneous T-cell lymphoma-associated antigen 1
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification. Caution, targets protein from more than one gene.
Reliability score	Uncertain based on 3 antibodies. HPA000387 , HPA000922 , CAB016204
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA000387	HPA000922	CAB016204

GENE INFORMATION
Gene name	CTAGE1 (HGNC Symbol)
Synonyms	CT21.1, CT21.2, CTAGE, cTAGE-1, cTAGE-2
Description	Cutaneous T-cell lymphoma-associated antigen 1 (HGNC Symbol)
Entrez gene summary
Chromosome	18
Cytoband	q11.2
Chromosome location (bp)	22413601 - 22417915
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000212710 (version 83.38)
Entrez gene	64693
UniProt	Q96RT6 (UniProt - Evidence at protein level), Q9HC47 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96RT6, NX_Q9HC47
Antibodypedia	CTAGE1 antibodies

PROTEIN BROWSER

CTAGE1-001	CTAGE1-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CTAGE1-001 ENSP00000375220 ENST00000391403	Q96RT6 [Direct mapping] cTAGE family member 2 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005575 [cellular_component] GO:0008150 [biological_process] GO:0016021 [integral component of membrane] Show all	745 aa 85.3 kDa	No	1
CTAGE1-002 ENSP00000436900 ENST00000525417	Q9HC47 [Direct mapping] Cutaneous T-cell lymphoma-associated antigen 1 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Show all	GO:0008150 [biological_process] GO:0016021 [integral component of membrane] Show all	74 aa 8.4 kDa	No	2

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.