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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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KRTAP3-3
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

KRTAP3-3

Gene description

Keratin associated protein 3-3

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enhanced (urothelial cancer)
HPA (cell line):Not detected
HPA (normal tissue):Not detected

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Expressed in the internal root sheath of hair.

ANTIBODY IHC RELIABILITY

Data reliability
description

Caution, targets protein from more than one gene. External characterization data supports antibody staining pattern while RNA data does not.

Reliability score

Approved based on 1 antibody.
HPA042992
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enhanced (urothelial cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA042992

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues were essentially negative.

GENE INFORMATION

Gene name

KRTAP3-3 (HGNC Symbol)

Synonyms

KAP3.3

Description

Keratin associated protein 3-3 (HGNC Symbol)

Entrez gene summary

This protein is a member of the keratin-associated protein (KAP) family. The KAP proteins form a matrix of keratin intermediate filaments which contribute to the structure of hair fibers. KAP family members appear to have unique, family-specific amino- and carboxyl-terminal regions and are subdivided into three multi-gene families according to amino acid composition: the high sulfur, the ultrahigh sulfur, and the high tyrosine/glycine KAPs. This protein is a member of the high sulfur KAP family and the gene is localized to a cluster of KAPs at 17q12-q21. [provided by RefSeq, Jul 2008]

Chromosome

17

Cytoband

q21.2

Chromosome location (bp)

40993430 - 40994133

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000212899 (version 83.38)

Entrez gene

85293

UniProt

Q9BYR6 (UniProt - Evidence at protein level)

neXtProt

NX_Q9BYR6

Antibodypedia

KRTAP3-3 antibodies

PROTEIN BROWSER

KRTAP3-3-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

KRTAP3-3-001
ENSP00000375428
ENST00000391586
Q9BYR6 [Direct mapping]
Keratin-associated protein 3-3
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0045095 [keratin filament]
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98 aa
10.4 kDa
No 0

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