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ANKRD39

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.2TPM
GTEx:9.3RPKM
FANTOM5:11.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA042678

  

Endothelial cells

 Medium  

Glandular cells

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

5.2
overview Male, age 54 Sample 1
TPM: 8.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.5
Samples: 149

Max RPKM: 17.2
Min RPKM: 4.3
Std RPKM: 2.4
Median RPKM: 10.3
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 17.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 17.1
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 16.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 16.0
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 15.5
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 15.4
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 15.3
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 15.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 15.3
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 15.1
Show all
Colon - Transverse
RPKM: 8.4
Samples: 196

Max RPKM: 15.7
Min RPKM: 3.7
Std RPKM: 2.2
Median RPKM: 8.2
GTEX-117YX-0826-SM-5H11J 50-59 years, male 15.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 14.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 13.4
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 12.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 12.5
GTEX-R55D-1826-SM-48FEF 50-59 years, male 12.5
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 12.4
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 12.4
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 12.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 12.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.3
FF:10014-101C5 62,83,84 years, mixed 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.